Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTTCTGGCTTTCAGCTGTCACC&GGTGCAGTCTCTGGAGCAGCAGCTGGAGCTGGAAA
.(((((((.(((((((((((((&))))..............)))))))))))))))).
Details
MiRNAmmu-miR-5623-3p
RefseqIDNM_054039
GeneSymbolFoxp3
Binding site985,1020
Binding p-value0.923
Seed1
Au0.412
Energy-24.0
Binding len35
Me-4.85
Phylopstem2.5319704444444437
Phylopflank2.09111214
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure