Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTGATTCAAGTGGTCTCTCGTGTCC&GGACCAGGGGCTCTGGGGGACCCTTCCAAGGTCGGG
((((((.(((.(((((((((.((((&.))))..))))))))))))....)))))).
Details
MiRNAmmu-miR-5625-3p
RefseqIDNM_054039
GeneSymbolFoxp3
Binding site384,420
Binding p-value0.846
Seed0
Au0.338
Energy-23.9
Binding len30
Me-8.306
Phylopstem0.6479560222222224
Phylopflank1.0164197499999998
Longest consecutive pairings12
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure