Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCAAAGCATCGCGAAGGCCCACGGCG&GCTGTGGGGGCAAGGAGGCAAGTCCTACGTGTACCTATGGA
(((.((...((((.(((((((((((.&))))))))...............))).))))...)).))).
Details
MiRNAmmu-miR-6240
RefseqIDNM_054039
GeneSymbolFoxp3
Binding site1619,1660
Binding p-value1.0
Seed0
Au0.426
Energy-25.8
Binding len41
Me-12.74
Phylopstem0.18055624230769227
Phylopflank0.33925411124999993
Longest consecutive pairings8
Position of longest consecutive pairings33
Pairings in 3prime end7
Position3UTR
2D Structure