Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGTAAGTGCTTTTAACTGCTGAGC&GCTGGGTTTAAGATCCCAGCAGGAGAAAGCGGATACC
.(((..(((((((..((((((...&.))))))..)))))))..))).
Details
MiRNAmmu-miR-6380
RefseqIDNM_054039
GeneSymbolFoxp3
Binding site2449,2486
Binding p-value0.846
Seed0
Au0.5
Energy-21.9
Binding len22
Me-11.406
Phylopstem-0.07084285714285718
Phylopflank0.06994591375
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end5
Position3UTR
2D Structure