Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTAAGGCAGGCAGACTTCAGTG&CACTGGGGTCTTCTCCCTCAAGGCCCGGCCTGGCCTGCCA
....((((((((((((((((((&))))))))))).....................))))))).
Details
MiRNAmmu-miR-6540-5p
RefseqIDNM_054039
GeneSymbolFoxp3
Binding site682,722
Binding p-value0.846
Seed0
Au0.368
Energy-28.1
Binding len40
Me-9.547
Phylopstem1.3222758205128209
Phylopflank1.5091739387499996
Longest consecutive pairings11
Position of longest consecutive pairings29
Pairings in 3prime end8
PositionCDS
2D Structure