Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGGGGTGAGAGAGAAGCTGGTG&CACCAGGCACATGGCTCCCCTCACCTCA
..((((((((.(((...((((((&))))))........)))..)))))))).
Details
MiRNAmmu-miR-6978-5p
RefseqIDNM_054039
GeneSymbolFoxp3
Binding site3181,3209
Binding p-value0.923
Seed1
Au0.412
Energy-23.3
Binding len28
Me-8.75
Phylopstem2.84852905
Phylopflank1.7649469825000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure