Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGACTTGCCTTCCACCCCAG&CTGAGGCTGTGGGGGCAAGGAGGCAAGTCC
.(((((((((((..(((((.&.)))))....))))))))))).
Details
MiRNAmmu-miR-6980-3p
RefseqIDNM_054039
GeneSymbolFoxp3
Binding site1614,1644
Binding p-value1.0
Seed1
Au0.426
Energy-28.1
Binding len22
Me-5.939
Phylopstem0.24049554545454546
Phylopflank0.26849156250000006
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure