Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGTATAACAGTCTTGGCTGG&CCAGCCAAGCCTATGGCTCCTTCCTTGGCCCTTGGCCCAT
(((((.....((.(((((((((&))))))))).))......................))))).
Details
MiRNAmmu-miR-12195-5p
RefseqIDNM_054039
GeneSymbolFoxp3
Binding site290,330
Binding p-value0.846
Seed0
Au0.397
Energy-20.9
Binding len40
Me-13.284
Phylopstem1.3526829
Phylopflank0.8776766475000001
Longest consecutive pairings9
Position of longest consecutive pairings31
Pairings in 3prime end8
PositionCDS
2D Structure